Yeah, can't say it will be possible to effectively bond a rod to the rotating portion of the pot since it's so small and glues tend to creep.
Also, the pots, according to the datasheet have a rotational life of 50 turns, so they're not really meant for "continuous" adjustment; more so, as Ron Popeil would say, "set it and forget it!" lol. Although I don't think there's any worry of it actually failing as long as you don't play with it all the time.
And, I agree, the small (I think 2mm) open-frame pots on DrLava's driver are very delicate and gluing something to them probably isn't a good idea. Since its open, its very easy to get glue in there and mess it all up, plus since its small, I wouldn't be surprised if you broke it or lifted it (or the pads) off the board with a lot of movement. The slightly bigger ones I use are also sealed-type (prevents contaminants from getting it) and a little sturdier, but still I don't think I'd want to try gluing an adjustment tool to it for fear of some of the same problems.
You could just drill an access hole for a tool to adjust. I'd also suggest doing something like put a piece of heatshrink (or other electrical insulation) around the rest of the board (aside from the pot) to prevent accidentally shorting anything on the board if you just HAVE to adjust while it's powered